Chromosome‐level genome assembly of the aphid parasitoid Aphidius gifuensis using Oxford Nanopore sequencing and Hi‐C technology
نویسندگان
چکیده
منابع مشابه
Oxford Nanopore MinION Sequencing and Genome Assembly
The revolution of genome sequencing is continuing after the successful second-generation sequencing (SGS) technology. The third-generation sequencing (TGS) technology, led by Pacific Biosciences (PacBio), is progressing rapidly, moving from a technology once only capable of providing data for small genome analysis, or for performing targeted screening, to one that promises high quality de novo ...
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1School of Biological Sciences, Center for Plant Science Innovation, University of Nebraska-Lincoln, Lincoln NE 68588, USA 2Department of Computer Science and Engineering, University of Nebraska-Lincoln, Lincoln, NE 68588, USA *Corresponding author: Kan Liu, School of Biological Sciences, Center for Plant Science Innovation, University of Nebraska-Lincoln, Lincoln NE 68588, USA, Tel: +1 402-472...
متن کاملOxford Nanopore sequencing, hybrid error correction, and de novo assembly of a eukaryotic genome.
Monitoring the progress of DNA molecules through a membrane pore has been postulated as a method for sequencing DNA for several decades. Recently, a nanopore-based sequencing instrument, the Oxford Nanopore MinION, has become available, and we used this for sequencing the Saccharomyces cerevisiae genome. To make use of these data, we developed a novel open-source hybrid error correction algorit...
متن کاملOxford Nanopore Sequencing and de novo Assembly of a Eukaryotic Genome
Monitoring the progress of DNA through a pore has been postulated as a method for sequencing DNA for several decades 1,2. Recently, a nanopore instrument, the Oxford Nanopore MinION, has become available 3. Here we describe our sequencing of the S. cerevisiae genome. We describe software developed to make use of these data as existing packages were incapable of assembling long reads at such hig...
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Conservation biological control involving the polyphagous aphid parasitoid, Aphidius colemani Viereck, may include provisioning resources from a variety of plant sources. The fitness of adult A. colemani was enhanced with the provision of food resources such as floral nectar from a range of both native and introduced plant species and aphid honeydew under laboratory conditions. However, enhance...
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ژورنال
عنوان ژورنال: Molecular Ecology Resources
سال: 2021
ISSN: 1755-098X,1755-0998
DOI: 10.1111/1755-0998.13308